Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKEKSLELPLGHPLVEKLCELSLNNKAAFNEKSEPNFKDEVSEEDKIKFKQALRVFHAIVNN---------ETSLRYLSDENQKFLEDLAQAKKITNEQIEKTLEIVSDSDVDVDFEKLKKLMLNVDSVAVGLKSYSQNQLLDLDGGHWDL |
5AXW Chain:A ((454-528)) | ----------------------------------------------KRSFIQSIKVINAIIKKYGLPNDIIIELAREKNSKDAQKMINEMQKRNRQTNERIEEIIRTTGKENAKYLIEKIKLHDMQEGKCLYSLEAIPLEDLLNNPFNYEVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4712 for 292 contacts (16.1/contact) +
2D Compatibility (PS) -7109 + (NN) -2916 + (LL) 2812
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -5801.0 ( -19.87 by residue)
QMean score : 0.426
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