Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGLMKGDAQDMQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKPIYYDNTILDPKTTNMNNMCMFDGYTHYLNLVLVNCPIELSGARELIEESEGVDGAVSKIASSHLCLKALAKGSEPLLHLREKIARLVTQTTTQKV |
| 1VH4 Chain:A ((170-254)) | -------------------------------------------------------------HYRHHLDLAEGAEATVIEHFVSL--NDARHFTGARFTINVAANAHLQHIKLAF-ENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30479 for 570 contacts (-53.5/contact) +
2D Compatibility (PS) -8685 + (NN) 851 + (LL) 4188
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -37975.0 ( -66.62 by residue)
QMean score : 0.374
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