Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLTPKELDKLMLHYAGELARKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVMDGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVPGEL-FLKNEDITINEGKKAVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIASGTAVRFEPGEEKSVELIDIGGNRRIFGFNALVDRQADNESKKIALHRAKERGFHGAKSDDNYVKTIKE |
3QGK Chain:A ((4-223)) | -KLTPKEQEKFLLYYAGEVARKRKEEGLKLNQPEAIAYISAHIMDEARRGKKTVAQLMEECVHFLKKDEVMPGVGNMVPDLGVEANFPDGTKLVTVNWPIEPD-DFKAGEIKFASDKDIELNAGKEITELKVTNKGPKSLHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIPIGGSKKIIGMNGLLNGIADDLHKQKALEKAKHHGFIK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41259 for 1510 contacts (27.3/contact) +
2D Compatibility (PS) -22600 + (NN) 842 + (LL) 164
1D Compatibility (HY) 10800 + (ID) 900
Total energy: 29565.0 ( 19.58 by residue)
QMean score : 0.179
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