Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKSNNDR-VDVFFELGCGSVLKGLNKR-LSNKPTISVGDNKGLDEAIEFLEEYV |
2CUY Chain:A ((2-301)) | --YAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAAYRAFLE--AGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRA-RVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174767 for 2774 contacts (-63.0/contact) +
2D Compatibility (PS) -31895 + (NN) -8604 + (LL) 964
1D Compatibility (HY) -12800 + (ID) 5350
Total energy: -232452.0 ( -83.80 by residue)
QMean score : 0.532
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