Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQF-ENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNY-----QWINNAKKALKNTGSLLISG--TYHNLFSLGRIL-------QKLDFKILNLITWQKTNPPPNFSC-RYLTHSAEQIIW-------------ARKSYKHKHVFNYEILKKIN-----NNKQMRDVWNFPAIAPWEKANGKHPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ |
1NW5 Chain:A ((46-260)) | --------------------------DCLDTLAKLPDDSVQLIICDPPY---------------NIMLADWD--------DHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIW---NYPNGMSAQRFFANRHEEIAWFAKTKKYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLRSYEIVEGAANFGAALQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59080 for 1161 contacts (-50.9/contact) +
2D Compatibility (PS) -19215 + (NN) -10996 + (LL) 3220
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -97871.0 ( -84.30 by residue)
QMean score : 0.359
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