Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLESLRGFAYAFFTILFTLFLYAYIFSMYRKQKKGIVDYERYGYLALNDALEDELIEPRHKEVHDKGIKES
2KNC Chain:B ((714-733))
-----------------------IWKLLITIHDRKEFAKFEEE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KNC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 823 for 75 contacts (11.0/contact) +
2D Compatibility (PS) -1915 + (NN) 487 + (LL) 4220
1D Compatibility (HY) -400 + (ID) 100
Total energy: 3115.0 ( 41.53 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_2KNC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KNC-query.scw
PDB file :
Tito_Scwrl_2KNC.pdb
: