Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKE-----------ELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLID----KIEKMLLIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYSDDK---QVFLDFIGNNLVVSNKSKPL-KEDFEKYLQPYFKS--SNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
4BIZ Chain:A ((62-270)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGASFNQMVTALERMMTSQQRLLSDISEELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDL-LVMSRNQQKNALVSETIKANQ---LWSEVLDNAAFEAEQM-----GKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40336 for 1130 contacts (-35.7/contact) +
2D Compatibility (PS) -19429 + (NN) -6470 + (LL) 19868
1D Compatibility (HY) -12000 + (ID) 2300
Total energy: -60667.0 ( -53.69 by residue)
QMean score : 0.326
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