Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAK--ALRMDEELQQKIESRKTDIVIQSMANILSGNE
1L2L Chain:A ((41-81))
----------------------------------------------YLKREDLEKRIEKVGKEEVLRYSEELPKEIET-----IPQLLGSILWSIK
General information:
TITO was launched using:
RESULT:
Template:
1L2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12959 for 222 contacts (-58.4/contact) +
2D Compatibility (PS) -4150 + (NN) -970 + (LL) 4284
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -19445.0 ( -87.59 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1L2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L2L-query.scw
PDB file :
Tito_Scwrl_1L2L.pdb
: