Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNFQYSTLENI-PKAFDILKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENAL---PKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQRLNE--SDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKFGDKLLEYELLGKIKRINHLVVLA |
3UQZ Chain:A ((74-266)) | ------FSILDDCYPWDLSEIYDAPVLLFYKGNLDLLKFP-KVAVVGSRACSKQGAKSVEKVIQGL-ENELVIVSGLAKGIDTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAMEEGRDVFAIPGSILDGLSDGCHHLIQEGAKLVTSGQDVLAEFEFH------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77979 for 1575 contacts (-49.5/contact) +
2D Compatibility (PS) -20384 + (NN) -6662 + (LL) 4748
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -116277.0 ( -73.83 by residue)
QMean score : 0.515
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