Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPAT--QDLIKEALLDAGQEVV
1OSD Chain:A ((5-65))
--VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTK-ATADAGYPSS
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54621 for 394 contacts (-138.6/contact) +
2D Compatibility (PS) -6432 + (NN) -3363 + (LL) 376
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -68940.0 ( -174.97 by residue)
QMean score : 0.832
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: