Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDMVDLKKFVTELGKTQKELKNVIEQAKDIGLELKTNFKMTPEQAGKLYKYIVDGIKEQIQANQPTKNPKQDNKDDLNTAATPKPLAKKASKTPKKEETKAQPKPKKTKEKKKEAPAPIIKKKEIEIVNTFENQTPLVENTPKAVSHSQIEKAKQKLQEIQKSREALNKLTQSNTNTTNNANSASNVSNAKKEISEVKKQEQEIKRHENIKRRTGFRVIKRNDETENETENSVTESKKPTQSAAAIFEDIKKEWQEKDKQETKKTKKPSKPKATPTAKNNKSHKIDFSDVRDFKGNDIYDDETDEILLFDLHEQDNLNKEEEEKEARQNINDRVRVQRKNPWMNEAGIKRQSKKKRVFRNDNSQKVIQSAIAIPEEVRVYEFAQKANLNLADVIKTLFNLGLMV-TKNDFLDKDSIEILAEEFHLEISVQNTLEEFEVEEVLEGVKKERPPVVTIMGHVDHGKTSLLDKIRDKRVAHTEAGGITQHIGAYMVEKNNKWVSFIDTPGHEAFSQMRNRGAQVTDIAVIVIAADDGVKQQTIEALEHAKAANVPVIFAMNKMDKPNVNPDKLKAECAELGYNPVDWGGEHEFIPVSAKTGDGIDNLLETILIQADIMELKAIEEGSARAVVLEGSVEKGRGAVATVIVQSGTLSVGDSFFAETAFGKVRTMTDDQGKSIQNLKPSMVALITGLSEVPPAGSVLIGVENDSIAR--LQAQKRATYLRQKALSKSTKVSFDELSEMVANKELKNIPVIIKADTQGSLEAIKNSLLELNNEEVAIQVIHSGVGGITENDLSLVSSSEHAVILGFNIRPTGNVKNKAKEYNVSIKTYTVIYALIEGMRSLLLGLMSPIIEEEHTGQAEVRETFNIPKVGTIAGCVVSDGEIARGIKARLIRDGVVVHTGEILSLKRFKDDVKEVSKGYECGIMLDNYNEIKVGDVFETYKEIHKKRTL |
4KJZ Chain:A ((3-469)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRIYQLAKELGMECQELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSL----PRRPPVVVIMGHVDHGKTTLLDYLRKSRIAE------TQHVGAFEVKTPQGTVVFIDTP-----------GAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAKLIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGTFRVGDYVVAGEAYGRIRAMMDADGNQRKEAGPGSAVQVLGFQELPHPGDVVEWVPDLEAAKEIAEERKEERKAREEEEKARRPRTMAELLRAMQEEGRKELNLILRADTQGSLEAIQHILARESTEDVKINILLAQVGAPTESDV-LLAQTANAAILAFGVNPPGSVKKKAEEKGVLLKTFRIIYDLVDEVRNMVKGQR------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236151 for 3514 contacts (-67.2/contact) +
2D Compatibility (PS) -48676 + (NN) -19350 + (LL) 31524
1D Compatibility (HY) -30000 + (ID) 8750
Total energy: -311403.0 ( -88.62 by residue)
QMean score : 0.487
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