Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVK----THKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-NKDELFLIANMVAQPKEGRATYERLFKVAKNNI-ASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
1HYQ Chain:A ((3-230)) | ---------------------------RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLA---GEARIDEAIYVGPGGVKVVPAGVSLEGLRK-ANPEKLEDVLTQ--IMESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLG---------IEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146251 for 1964 contacts (-74.5/contact) +
2D Compatibility (PS) -24569 + (NN) -12525 + (LL) 4064
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -196231.0 ( -99.91 by residue)
QMean score : 0.527
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