Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKI--TPFKEEVYAKGVLVL---------WSENLKMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIG--FGALSLIDKKDKNLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 1WOD Chain:A ((5-232)) | -----------------------ITVFAAASLTNAMQDIATQFKKEKGVDVVS-SFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNG---GRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDS--HKKVEYPVAVVE-GHNNATVKAFYDYLKGPQAAEIFKRYGFTIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103519 for 1833 contacts (-56.5/contact) +
2D Compatibility (PS) -22563 + (NN) -5524 + (LL) 3020
1D Compatibility (HY) -8000 + (ID) 3250
Total energy: -139836.0 ( -76.29 by residue)
QMean score : 0.613
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