Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQ---KDFLSLKHAPQFDCIFTNPPWG-----KKYN----QNQKENFKQQFNLHQS-LDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCF-YQNSEFKRSPSSFFNNP---KKIFNIHCSHQK-----NKILDHLFSL----------PHITLKNNAHFAL-GIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFK---THKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
2IBT Chain:A ((21-409)) | ----------------------------------------------------------------------------------------------------------------VETPPEVVDFMVSLAEAPRGGRVL--EPACAHGPFLRAFREAHGTAYRFVGVEIDPKA-------------LDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKS---GKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKN----HSGLWMPKERAK--------ELRD--------FYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLP-KEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRM-LERLPVRREYGFHT------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147205 for 2746 contacts (-53.6/contact) +
2D Compatibility (PS) -36899 + (NN) -4617 + (LL) 12508
1D Compatibility (HY) -20000 + (ID) 4350
Total energy: -200563.0 ( -73.04 by residue)
QMean score : 0.377
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