Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLPRVPIDILLGGPPCQSYSTLGKRK--MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFK-QKFYFPKPIKTHFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV |
1MHT Chain:A ((13-306)) | --RFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEKPE--GDITQVNEKTIP--DHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLL-----------------LPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIY--STRGIAITLSAYGGGIFAK-----TGGYLVNGKTRKLHP--------RECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGSSLNFKPY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84015 for 2353 contacts (-35.7/contact) +
2D Compatibility (PS) -30696 + (NN) -7920 + (LL) 1568
1D Compatibility (HY) -14000 + (ID) 4650
Total energy: -139713.0 ( -59.38 by residue)
QMean score : 0.370
|
|
|