Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTLVKNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLDEIFSTTSPSANNKIGQEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIKKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK
3ZCI Chain:A ((4-212))
--------------------EDITSGLKQLDSTYQETNQQVLKNLDEIFS--------EMGEEDALNIATAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKIN-------------SDKVLVLYCEGKLKIEATAQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQER--------
General information:
TITO was launched using:
RESULT:
Template:
3ZCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27118 for 1259 contacts (-21.5/contact) +
2D Compatibility (PS) -20654 + (NN) -14196 + (LL) 3804
1D Compatibility (HY) -26800 + (ID) 8900
Total energy: -93864.0 ( -74.55 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3ZCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZCI-query.scw
PDB file :
Tito_Scwrl_3ZCI.pdb
: