Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKRAKTKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALA---SLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLFKDNLS-KLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA
2ABK Chain:A ((3-203))
------KAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKL---YPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
General information:
TITO was launched using:
RESULT:
Template:
2ABK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118050 for 1522 contacts (-77.6/contact) +
2D Compatibility (PS) -20778 + (NN) -9776 + (LL) 964
1D Compatibility (HY) -12800 + (ID) 3900
Total energy: -164340.0 ( -107.98 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2ABK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABK-query.scw
PDB file :
Tito_Scwrl_2ABK.pdb
: