Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESLKV-GVYKQLNYVYDTISQTRQKLSKEKA-----LIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRY--AHIPVILFPKGIGAYLDSIDGE-FDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGVEKILKVMGNQ-GHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR |
| 4EXQ Chain:A ((14-360)) | --FLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLERFPLDAAILFSDILTIPDAMGLGLDF----GPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGGGLWLEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHSRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276424 for 2960 contacts (-93.4/contact) +
2D Compatibility (PS) -35976 + (NN) -15971 + (LL) 604
1D Compatibility (HY) -29200 + (ID) 7600
Total energy: -364567.0 ( -123.16 by residue)
QMean score : 0.609
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