Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPKMNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEKY--IDEEKGLILWDTKGIEDKDYHDTMQSIKKEMEDSFKTLDEK--EAIDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFTHT-QAEAG-DAFVQETK--GIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP |
| 2LKC Chain:A ((6-142)) | -----------------------------------------ERPPV-VTIMGHVDHGKTTLLDAIRHSKVTEQEAGG-ITQHIGAYQVTVNDKKITFLDTPGHE-----------------AFTTMRARGAQVTDIVILVVA-ADDGVMPQTVEAINHAKAANVPIIVAINKMDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMILLVSEMEELKANP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40484 for 867 contacts (-46.7/contact) +
2D Compatibility (PS) -13593 + (NN) -3554 + (LL) 16460
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -51321.0 ( -59.19 by residue)
QMean score : 0.467
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