Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIEN-EDIEKKIYY---INRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
4IWB Chain:A ((38-159))
LQLLRGAEAYFQNQVETATPLEQIILLYDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDHEKGKEIAKNLDTIYT--IILNTLVKVDKTKEELQKILEILKDLREAWEEVKKKVHH
General information:
TITO was launched using:
RESULT:
Template:
4IWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53748 for 732 contacts (-73.4/contact) +
2D Compatibility (PS) -12262 + (NN) -3606 + (LL) 164
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -80052.0 ( -109.36 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_4IWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IWB-query.scw
PDB file :
Tito_Scwrl_4IWB.pdb
: