Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS
2P0T Chain:A ((109-152))
----ERWRD----RLIAGDDADLEKFVIEYPD--A------DRQQLRSLIRQAQHEVARNKPPATSRKIFKYIRELDEL
General information:
TITO was launched using:
RESULT:
Template:
2P0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27315 for 220 contacts (-124.2/contact) +
2D Compatibility (PS) -4972 + (NN) -5358 + (LL) 792
1D Compatibility (HY) 0 + (ID) 300
Total energy: -37153.0 ( -168.88 by residue)
QMean score : 0.883
(partial model without unconserved sides chains):
PDB file :
Tito_2P0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P0T-query.scw
PDB file :
Tito_Scwrl_2P0T.pdb
: