Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLD----FFDDEELLPLDNVLEFLKIAIDEGVKKIRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDALKNT-LEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFME--NTHAKSLVKGLKEKEILDLIAQKYKIMGMEKPKQGSSKIYTL--ENGYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
| 2FB2 Chain:A ((7-280)) | ---DKLGRPIRDLALSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTAAALSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121113 for 2038 contacts (-59.4/contact) +
2D Compatibility (PS) -29152 + (NN) -21580 + (LL) 856
1D Compatibility (HY) -27200 + (ID) 5650
Total energy: -203839.0 ( -100.02 by residue)
QMean score : 0.469
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