Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S06 Chain:A ((7-162))
-------------------------------------------------------------------------------------------------ATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNPH----
General information:
TITO was launched using:
RESULT:
Template:
3S06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53959 for 1069 contacts (-50.5/contact) +
2D Compatibility (PS) -17280 + (NN) -14606 + (LL) 7400
1D Compatibility (HY) -20400 + (ID) 7500
Total energy: -106345.0 ( -99.48 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3S06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S06-query.scw
PDB file :
Tito_Scwrl_3S06.pdb
: