Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTIKKGVALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
2O7K Chain:A ((4-104))
----VKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL-
General information:
TITO was launched using:
RESULT:
Template:
2O7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67913 for 728 contacts (-93.3/contact) +
2D Compatibility (PS) -10649 + (NN) -3229 + (LL) 144
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -96247.0 ( -132.21 by residue)
QMean score : 0.732
(partial model without unconserved sides chains):
PDB file :
Tito_2O7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7K-query.scw
PDB file :
Tito_Scwrl_2O7K.pdb
: