Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKQALSLSQDELETLKNEIDAKVRASDLNAYIKAPSLNGASAK--------GVPILIKDNISVKGWEITCSSKILEGYVAPYHASAIENLHQNGMAGFGLSNMDEFAMGSTTESSCYGITKNPRDKNIVPGGSSGGSAAAVAGGLTVAALGSDTGGSIRQPASYCGCVGLKPTYGRVSRYGVIAYRSSFDQIRPITQNVEDASILFDAISGYDSKDSTSANLKPTHTFINLIRD-KRFKIAILRDHINDA-SNEVQLAYENTIKALKEMGHEVVEKKMLDSHYQISIYYIISMAEASSNLARFDGVRYGRRAQNVKDLKELYLKSRSEGFGDEVKRRIMLGNFVLSSGYYDAYYLKAQQMRLMIKEQYNKIFEEVDLIFTPVAPTTAY-LFNYHASPLEMYLSDIYTIGANLSGLPALSLPVAKDPLGLPIGMQFIAKAFDEQSLLDVSYALEQELDLKLD |
| 2DF4 Chain:A ((50-478)) | -------------------------------NAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSN-GRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148144 for 4024 contacts (-36.8/contact) +
2D Compatibility (PS) -44755 + (NN) -9761 + (LL) 3028
1D Compatibility (HY) -34400 + (ID) 10700
Total energy: -244732.0 ( -60.82 by residue)
QMean score : 0.412
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