Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRT-AALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKKLADKIMVDLIGFF----------IQDENRPARN----EVFLALESLGFKSAEINP-VLKTLKPHLSIEAAIKEALQQLRS
1CUK Chain:A ((19-200))
------------------IEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP--------TDDAEQEAVARLVALGYKPQEASRMVSKIARPDASSETLIREALRAAL-
General information:
TITO was launched using:
RESULT:
Template:
1CUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113313 for 1029 contacts (-110.1/contact) +
2D Compatibility (PS) -16641 + (NN) -3889 + (LL) 2476
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -144667.0 ( -140.59 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1CUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CUK-query.scw
PDB file :
Tito_Scwrl_1CUK.pdb
: