Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDP-SKVLSSKENQIHRLLLELLEEAKLHFEPKLYII-NAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
4OHR Chain:A ((34-105)) | ------------------------------------------------------------------------------GSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIE-------HFESRGTTVYNAHRREAWGAEF--------LSPAEATRLDHDEIKAADVFVAFPGVPASPGTHVEIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEILRFSGTEEIVERLDGAVARVLGRAGEPTVI--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13448 for 432 contacts (-31.1/contact) +
2D Compatibility (PS) -7566 + (NN) -5307 + (LL) 15984
1D Compatibility (HY) -2800 + (ID) 1300
Total energy: -14437.0 ( -33.42 by residue)
QMean score : 0.267
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