Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRASFVEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQ-AEVFSQMALKSQKRLKVHLKIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLNDIEAKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
4A3Q Chain:A ((7-368)) | ---RSAYMNVDLNAVASNFKVFSTLHP-NKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHF-----DMTTEQYQRFK-------DMVNEAIKPEYIHCQNSAGSLLM----DCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKT------------------TTIALLPIGYADGYLRIMQGSF-VNVNGHQCEVIGRVCMDQTIVKVPD-QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213886 for 2861 contacts (-74.8/contact) +
2D Compatibility (PS) -35747 + (NN) -616 + (LL) 2180
1D Compatibility (HY) -29200 + (ID) 6300
Total energy: -283569.0 ( -99.12 by residue)
QMean score : 0.499
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