Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIAVFGGGAWGRALAFAFGEK-NEVKI--ISRRDLNEPLKKLNDALISKGSAPIEQV----DLERGLKAA-LYVIAISVQHLREWFQNA-------SLPKNAKVLIASKGIEVLNKAFVSEIAKDFIDPNALCFLAGPSFAAEIIQGLPCALVIHSNNQALALEF----ANKTPSFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILSRNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASEL-ALLLKGKSVLESMNDLIRRA |
| 1JDJ Chain:A ((20-343)) | ----VFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFV-CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQR---AVAEGVATADPLMRLAKQLKVKMPLCHQIYEIVYKKKNPRDALADLLSCG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209279 for 2631 contacts (-79.5/contact) +
2D Compatibility (PS) -32277 + (NN) -5748 + (LL) 868
1D Compatibility (HY) -24800 + (ID) 5300
Total energy: -276536.0 ( -105.11 by residue)
QMean score : 0.510
|
|
|