Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDNLEHVLLASFSHKPIITLSQRLCQLTG--MDKCFYADNGSSCIEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDV-----KLYKDTYTPLLLKNLITPVPKN--DSEI-ENSLNALKRLLDKHGEEICAFIAEPLLQCAGNMHIYSAKYLKQAVLWCKQKNIHIIFDEIATGFGRTGSMFAYEQCGIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSEFIFSALQNALKPLIERQVVSDLRHLGMVFAFEVFLQTKERLSLAVFKK-ALKKGLLLRPLNNTIYLMPPYIITHEEIKKAIAGLVEAIDELKKAENK |
1MGV Chain:A ((7-423)) | --------AFDQRHILHPYTSMTS--PLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQR--FLTFRNGYHGDTFGAMSVCDPDNSMHSLWKG-YLP---ENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETIS--NGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIE----VQLREQLAPARDAEMVADVRVLGAIGVVE----TTHPVNMAALQKFFVEQGVWIAPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -302053 for 3506 contacts (-86.2/contact) +
2D Compatibility (PS) -43482 + (NN) -14459 + (LL) 3144
1D Compatibility (HY) -36000 + (ID) 7550
Total energy: -400400.0 ( -114.20 by residue)
QMean score : 0.469
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