Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFFDTLMGMFVEPSQKVAKSLAEHVGSFFHAQLILNTIITILFMIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNTNLSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPKIIMFFLVILGELLFLGLLLIIVLLVTAEIFMWSALGLIVLPLGLIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNY---GIIYKVNTLIPTKHEVTQGFYGNADKMANEGKIIDV------FGNVLKGDWNSYIAHSSIVGFLTIIVLGSVICFFLVKRVPDFINNIFGTSGGVGAVTEMMQKIGMTIGGAVFGGSAVMVANQVKQAYQSAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVKAGVKHFVASVKSGFGFDNDKNNK
2SRC Chain:A ((133-206))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK


General information:
TITO was launched using:
RESULT:

Template: 2SRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17112 for 239 contacts (-71.6/contact) +
2D Compatibility (PS) -6479 + (NN) 1051 + (LL) 19096
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -8494.0 ( -35.54 by residue)
QMean score : 0.154

(partial model without unconserved sides chains):
PDB file : Tito_2SRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2SRC-query.scw
PDB file : Tito_Scwrl_2SRC.pdb: