Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFQNENKLKVGASVKATI-NDKVVEAKVISIGF-NRVTLRSEKGQRSHLRFQ
3QII Chain:A ((21-61))
-------EFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKFYDGVVQTVKHI
General information:
TITO was launched using:
RESULT:
Template:
3QII.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7557 for 213 contacts (-35.5/contact) +
2D Compatibility (PS) -4329 + (NN) -75 + (LL) 232
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -15279.0 ( -71.73 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3QII.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QII-query.scw
PDB file :
Tito_Scwrl_3QII.pdb
: