Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRLTAKEAEKLLLQNGFVFSRQKGSHRIYVKDK-IRQVLPFHSGEILHPKIVKEIMENTLK
1WHZ Chain:A ((2-61))
WMPPRPEEVARKLRRLGFVERMAKGGHRLYTHPDGRIVVVPFHS-GELPKGTFKRILRDAGL
General information:
TITO was launched using:
RESULT:
Template:
1WHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20959 for 367 contacts (-57.1/contact) +
2D Compatibility (PS) -6596 + (NN) -3850 + (LL) -172
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -34077.0 ( -92.85 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_1WHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WHZ-query.scw
PDB file :
Tito_Scwrl_1WHZ.pdb
: