Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAISNGFDPMFKFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSRYKQD------IVLLLKGKGPDEKKIKLLAQKLGVKTEFGFVNSH---ELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLF----EPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
3C4V Chain:A ((226-408)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAFVGRLQPFKGPQVLIKAVA-ALFDRDPDRNLRVIICGGP------TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASG-TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL---LDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92046 for 1274 contacts (-72.2/contact) +
2D Compatibility (PS) -18017 + (NN) -11279 + (LL) 15592
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -118400.0 ( -92.94 by residue)
QMean score : 0.563
|
|
|