Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSWREGLCE---VVR-IPLNEHGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAH----ANPKDCEYQTGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYG--NLTASRVGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 1T3I Chain:A ((120-411)) | ----------------------------------------------------------------------------------------------------------------------------------------EIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHF-KTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVA--SGHKMCAPTGIGFLYG--KEEILEAMPPFFGGGEMIAEV-FFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQD-GIAIRSGHHCTQPL-HRLFDAS-----------GSARASLYFYNTKEEIDLFLQSLQATIRFFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138546 for 2186 contacts (-63.4/contact) +
2D Compatibility (PS) -30205 + (NN) -11699 + (LL) 10484
1D Compatibility (HY) -13200 + (ID) 4250
Total energy: -187416.0 ( -85.73 by residue)
QMean score : 0.347
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