Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTSFIFEVVEKLGIKE--KGYKLLTNVGKNAGQEVMHLHFHILSGDKH
3OMF Chain:A ((10-111))
--IFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYK-VSLIGKKECPEGYRVVNNIGEDAGQTVKHIHFHILGGKKL
General information:
TITO was launched using:
RESULT:
Template:
3OMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59819 for 674 contacts (-88.8/contact) +
2D Compatibility (PS) -10947 + (NN) -6331 + (LL) 320
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -89077.0 ( -132.16 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3OMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OMF-query.scw
PDB file :
Tito_Scwrl_3OMF.pdb
: