Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGIDNSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKE-----ASAFSLLFVLQFVRPMQREVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIA--FKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT
3DTN Chain:A ((11-226))-----------------DAVSGKYDEQRRKFIPCFDDFYGVSVS-IASVDTEN--------PDILDLGAGTG-LLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSI----HHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGY----LDKDI---EMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKT


General information:
TITO was launched using:
RESULT:

Template: 3DTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107131 for 1577 contacts (-67.9/contact) +
2D Compatibility (PS) -22036 + (NN) -6191 + (LL) 2804
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -147454.0 ( -93.50 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_3DTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DTN-query.scw
PDB file : Tito_Scwrl_3DTN.pdb: