Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKSAIFVLSGFLAFLLYALLLYGLLLERHNKEAEKILLDLNKKDEQAIDLNLEDLPSEKKNEKIEKVTEKQGDF---LEPKEEPKEEPEESLEDIFSSLNDFQEKTDKNAQKDE-----QKNEQEEQRRLREQQRLKQ-NQENQEMLKGLQQNLNQFTQKLESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWRGVFYHKASVSVLIMITKDGEFDYTILSYSDFKDYNKSVMTLLDDLKKVDFPPYPGGNMISIKVNFTTKEEQ |
| 4DVZ Chain:A ((569-711)) | -----------------------GLSLQEANKLIKDFLSSNKELAGKALNFN-KAVAEAKSTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNK-----KAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKN--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 67447 for 634 contacts (106.4/contact) +
2D Compatibility (PS) -14507 + (NN) -7056 + (LL) 9976
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: 48910.0 ( 77.15 by residue)
QMean score : 0.327
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