Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVIRLTRIGRKKKPFYRVVVTDSRKRRDGGWIESIGYYNPLSEPKD--VRIDKERLNYWKGVGAKMSERVEKLSQKA
4ADV Chain:P ((1-74))
MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEV
General information:
TITO was launched using:
RESULT:
Template:
4ADV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37205 for 454 contacts (-81.9/contact) +
2D Compatibility (PS) -7681 + (NN) -2924 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -55610.0 ( -122.49 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4ADV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADV-query.scw
PDB file :
Tito_Scwrl_4ADV.pdb
: