Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLDRQSLEKAKHLIQSGLIDTIEVGAIKGLQEIHRFLFEGLYEFAGKIRDKNIS--NFRFANCLYLDLILPRMESMPQNNFNQIIEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIALWDRIDKAAYLSAIKRSPVNDLEIKTLLKKHLSSNINDSLTFIKGITQSYYYEGL
3SN9 Chain:A ((11-167))
--IDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVD------------------
General information:
TITO was launched using:
RESULT:
Template:
3SN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78874 for 1132 contacts (-69.7/contact) +
2D Compatibility (PS) -16767 + (NN) -7989 + (LL) 1336
1D Compatibility (HY) -19200 + (ID) 4700
Total energy: -126194.0 ( -111.48 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_3SN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SN9-query.scw
PDB file :
Tito_Scwrl_3SN9.pdb
: