Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPHTPL---GSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDH-EKDKGEQRQK-EGELIK--AFDLPLSLIERTQEC
1XAX Chain:A ((45-146))
---------------------------------IVDEAESHELNLTYRGKDRPTNVLSFPFECPDEVELPLLGDLVICRQVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGF-------------
General information:
TITO was launched using:
RESULT:
Template:
1XAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31659 for 596 contacts (-53.1/contact) +
2D Compatibility (PS) -10300 + (NN) -2676 + (LL) 4404
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -48731.0 ( -81.76 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1XAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XAX-query.scw
PDB file :
Tito_Scwrl_1XAX.pdb
: