Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVKRLNPDALKSALQKIGPEKIAQTHMRQKGVSFVFEIQHLPLSAALILKQEAISVGGDFATPRDCILAKEPFYDGVLIASAKQLERLIVKCHSQPFGLKHLAQELKSHLKAKKPNAPQIMAILNLTPDSFYEKSRFDSK-KALEEIYQWLEKGITLIDIGAASSRPQSEIIDPKVEQDRLKEILLEIKSQKLYQRAQFSIDTYHATTAQMALEHYFSILNDVSGFNSIEMLEVARDYQ-PTCILMHAQKTPKDMQENVFYHNLFDEMDRFFKEKLEVLEKYTL--QDIILDIGFGFAKLKEHNLALIKHLSHFLKFKKPLLVGASRKNTIGLITGREVQDRLAGTLSLHLMALQNGASILRAHDIDEHIDLIKVFKSLEETD |
1AJ0 Chain:A ((15-271)) | ----------------------------------------------------------------------------------------------------------------------PHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV-EAIAQRF--EVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVC-LMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AJ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129290 for 2084 contacts (-62.0/contact) +
2D Compatibility (PS) -27671 + (NN) -18374 + (LL) 9904
1D Compatibility (HY) -14800 + (ID) 4350
Total energy: -184581.0 ( -88.57 by residue)
QMean score : 0.483
|
|
|