Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRFDLRPLKADIFERLEELIEKEMQPNEVAIFMFEVGDFSNIPKSAEFIQSKGHELLNSLRFNQADWTIVVRKKA
4ETP Chain:A ((114-147))
-KIFDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYK
General information:
TITO was launched using:
RESULT:
Template:
4ETP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5422 for 142 contacts (-38.2/contact) +
2D Compatibility (PS) -3687 + (NN) -1567 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -14168.0 ( -99.77 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_4ETP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ETP-query.scw
PDB file :
Tito_Scwrl_4ETP.pdb
: