Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESY-----TPDFSSPTWYEELQERMQKEYLKHYHELNA |
| 2QI9 Chain:C ((58-92)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGQPLEAWSA-TKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2497 for 109 contacts (-22.9/contact) +
2D Compatibility (PS) -3286 + (NN) -3320 + (LL) 13652
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 1849.0 ( 16.96 by residue)
QMean score : 0.128
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