Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDK-DNPRTKN-----RPSVDGRISVKGMVIFSVSNALLFVGVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFVV---GLALGLAPIAGSVAVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALICWLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA |
4TQ4 Chain:A ((63-234)) | --------------------------------------------------------------FSFTINALYDRDVDRLHDGRVKDLNLSMQPLVTGEISVREAWLYCIAFLALSLATAAAINEKFFLAMLGANIIGYVYSAPPRFKAWPVMDVICNALAAVLAFYAGLSIGGAEVP---IAIYPAAFFLAATFYIPTAVSDYEFDKKAGLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMAERIEIKVISPLIIAYTLIYTFIINSRWDGEKLNVSPNLILTPFGIISALFIAYGFAVIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93834 for 1129 contacts (-83.1/contact) +
2D Compatibility (PS) -16969 + (NN) -9597 + (LL) 6984
1D Compatibility (HY) -6400 + (ID) 2400
Total energy: -122216.0 ( -108.25 by residue)
QMean score : 0.280
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