Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETTIDFSRYSSVKIGAPLKVSVLENDNEISQ----EHQIIGLANNLLI----APD-VKNLALLGKNYDYICDKGEWVEVGGAANASKIFNYFRANDLEGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACV--NGEW--LEKEALGLDYRSSGF--NGVVLRARFKKTHGFREGVLKACKSM---RKSHPKLPNFGSCFKNPPNDYAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR |
| 2GQT Chain:A ((14-251)) | ----------YTTLGVGGPAELWTVETREELKRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDL---KG-WV--GAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFHDGAFHVYCPEELGFGYRKSHLPPGGIVTRVRLKLKERPKEEILRRMAEVDRARKGQPKRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105231 for 1696 contacts (-62.0/contact) +
2D Compatibility (PS) -23371 + (NN) -4720 + (LL) 2148
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -148324.0 ( -87.46 by residue)
QMean score : 0.380
|
|
|