Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEFILKIQAKDSKGLVSAISATIANKGYNIVKNDEFVDPLKQRFFMRLKIQKEMK--PLNTEIKEQEERSLKTALFKALENFSELLIEVILTHKKNIILLATKESHCLGDLLLRVYGGELNAQILGVISNHEILRPLVEKFD---IPYFYAPCVDQILHEKEVLATIKDLELKHKVSADLLVLAKYMRILSHDFTKRYENQILNIHHSFLPAFIGANPYQQAFERGVKVIGATAHFVNESLDAGPIILQDTLPINHNYSVEKMRLAGKDIEKLVLARALKLVLEDRVFVHENKTVVF |
3OBI Chain:A ((6-286)) | --QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLA---------SLRTGFGVIAAKFTMGWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHP--RETFSGFDFGDIPFYHFPVNKDTRRQQEAAIT----ALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISHRDTPADLVRKGRDIERRVLSRALHYHLDDRVILNGRKTVVF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190119 for 2153 contacts (-88.3/contact) +
2D Compatibility (PS) -29423 + (NN) -6940 + (LL) 2088
1D Compatibility (HY) -20400 + (ID) 5500
Total energy: -250294.0 ( -116.25 by residue)
QMean score : 0.448
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