Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTA---------YATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPEHRIKCEVA---HNPNKHQRG-SISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIESVVFSPSL
2A2N Chain:A ((13-152))
-----------------QAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVT--KGMEVVQRISNVKVNPKTDKPYED
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70819 for 919 contacts (-77.1/contact) +
2D Compatibility (PS) -13592 + (NN) -4912 + (LL) 1460
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -99113.0 ( -107.85 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: