Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGNGRFIKKVENSIELLQLNDNPKA
3VO2 Chain:A ((267-284))
MCGLKGMEKGIDDIMLNLAAKDGIDW
General information:
TITO was launched using:
RESULT:
Template:
3VO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2538 for 65 contacts (-39.0/contact) +
2D Compatibility (PS) -1853 + (NN) 22 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -6219.0 ( -95.68 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_3VO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VO2-query.scw
PDB file :
Tito_Scwrl_3VO2.pdb
: