Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL |
1GV1 Chain:A ((1-37)) | -------------------------------------MKITVIGAGNVGATTAFRIAD-------KKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8391 for 192 contacts (-43.7/contact) +
2D Compatibility (PS) -3812 + (NN) 490 + (LL) 2776
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -13287.0 ( -69.20 by residue)
QMean score : 0.091
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